Proof load on a single 1/4-20 grade 2 all thread is 1750#, and there's 2 of them. If anything, I could see the bottom lid flexing near the ends and leaking boost. As Drew said, if it leaks, I'll change it.
What you mentioned there is the only thing I'd be concerned about; certainly not the fasteners. Its a good idea to have a plan in place to address that, because even at only 5 psi I think there's a good chance you will deform that flange and leak some boost. Of course, you might be able to get away with a leak there as long as its not a big one.
On my supercharged FE, running between 10 and 17 pounds of boost, I've blown some aluminum tubing out of the rubber connecting hoses with rather spectacular results...

Found out the hard way that you need a lip on every piece of tube, to make sure that the rubber can't slip off under boost. I ended up welding a lip on some pieces of aluminum tubing to solve the problem.
Really cool project, by the way...