Mike, sorry I missed this. The first two things I would do for any Holley kit
1 - Check the pinout location and color on any plug to the diagram. One Terminator X I used had 3 pairs wired backwards, I know you cut some, but my recommendation would be to check everything to the schematic before you install.
2 - Make a list of every part you plan to use, then go to the Holley support page and see if it needs a special setup. In other words, in some cases, a plug and play distributor is chosen from the drop down by it's part number during programming, in others, it's set up as Generic with desired settings to make it work. There seems to be no rhyme or reason which way any specific distributor will go.
Last, I am happy to look at the config file before, or after if you have problems, just let me know.