I do it just like Brent
1 - Check all bearing clearances, drop crank in
2 - Check end play with the bottom in
3 - Check with the thrust cap on
4 - Assemble rear main seal last
What I didn't do before, that I do now, is a quick clearance check and torque all 5 before balancing. I still check at final assembly, but do a quick one before.
I had a SCAT crank that had a poorly machined oil slinger on the rear main. I had the crank finished, and when I went to put the rear main cap on the engine wouldn't turn. Odd because I measured run out, block was line-honed, and all clearances were spot on. Head scratcher for a moment, because if the mains are in alignment, clearances are good, and runout is good, what could bind?
Turns out, the crank slinger was hitting the cap at final assembly. SCAT machined it incorrectly. It was easy to fix, but it was mine to fix because I had already balanced and polished the crank.
In the end, I try to work as efficiently as I can, but SCAT now convinced me to do a check before balancing, which sometimes is a pain based on timing of other parts being ready. Not your question of course
In the end though, the rear seal doesn't go in until I am ready to be done with everything associated with the mains