The sonic testers I've seen have indeed had a radiused face, so that the center of the probe fits right up against the cylinder bore. I friend of mine bought one with a flat face and had it machined into a radius, but it looked different than the one in your photos, and I don't know if yours could be modified in the same way. Other than that, the one key thing about using the sonic checkers is that they need to be calibrated properly to give accurate results. I've seen several sets of sonic check data that don't pass the smell test, and the probable cause is that the checker is out of calibration. To check calibration you need to find a part of the block, like down by the oil pan rail, where you can measure the thickness with a micrometer. Then you can check the same spot with your sonic checker, and adjust the calibration until you get the same thickness.
Hope that helps - Jay